Reports said the defense systems would be deployed near the island of Okinawa to shoot down the rocket should it threaten Japanese territory.
North Korea says the rocket will put a satellite into orbit.
But the US and its allies believe the launch is a pretext for a missile test.
Pyongyang said last week it was to mark the 100th birthday of its late Great Leader Kim Il-sung with the launch.
The announcement drew widespread criticism that the launch would violate UN Security Council resolutions.
The resolutions were imposed after a similar launch in April 2009. Japan is particularly concerned as the last North Korean rocket was launched over the country.
“I have ordered officials to prepare to deploy the PAC-3 and Aegis warships,” Naoki Tanaka said.
The Japanese parliament also passed a resolution condemning the launch.
South Korea, China and the US have also expressed concern over the planned North Korean launch.
“It would be a grave provocation threatening the peace and security of the Korean peninsula and north-east Asia,” the South Korean foreign ministry said in a statement.
Nuclear envoys from South Korea and Japan held talks in Seoul to work out how they would respond if the launch were to go ahead, South Korea’s Yonhap news agency reported.
US Secretary of State Hillary Clinton called North Korea’s announcement “highly provocative”.
UN Secretary General Ban Ki-moon said any launch could discourage aid donors.
“Such an act would undermine recent positive diplomatic progress and, in its effect on international donors, would likely worsen the humanitarian situation inside the country,” he said in a speech in Singapore.
Last month, Pyongyang agreed to suspend long-range missile tests as part of a deal for the United States to supply 240,000 tons of food aid to North Korea.
It also agreed to suspend uranium enrichment and to allow back UN weapons inspectors as part of the deal.
A US state department spokesperson said it would be “hard to imagine” giving food aid to North Korea, as previously agreed, if Pyongyang went ahead with the rocket launch.
In the launch three years ago, Pyongyang said the satellite made it into orbit and characterized it as a test of its satellite technology.
The move drew condemnation from the US and South Korea and led to the UN resolutions prohibiting the North from nuclear and ballistic missile activity.
Foreign officials said there were no indications that a satellite had reached space and that the launch was a cover for Pyongyang to test long-range missile technology.
North Korea said last week that the launch of a rocket carrying a satellite would take place between 12 and 16 April.
The ”working satellite”, the Kwangmyongsong-3, is an opportunity for ”putting the country’s technology of space use for peaceful purposes on a higher stage”, said a North Korean spokesman.
The rocket would be launched from the Solace Satellite Launching Station in Cholsan county, North Pyongyang province on the country’s west coast.
State media also reported that North Korea has already launched two experimental satellites.
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