Bowe Bergdahl, 28, will fly to a military medical centre in Texas for the next part of what the military calls a “reintegration mission”.
Officials previously said he would be reunited with his family there.
Sgt. Bowe Bergdahl was freed on May 31 in exchange for five Taliban commanders held at Guantanamo bay, a deal criticized by the Republicans.
He has been recuperating at a military hospital in Germany since his release.
Critics of the prisoner swap, which include some Democrats, have objected to the fact Congress was not given notice of the deal, and they say the detainees are too dangerous to free.
Shortly after his release, several commentators and soldiers came forward to brand him a deserter and call for him to be punished.
The Pentagon has concluded he left his post in Paktika Province without authorisation but it is unclear if he intended to desert from the Army. The Army has said it will investigate the circumstances of his capture, leaving open the possibility he could be prosecuted for misconduct.
His family has received death threats and a welcoming party in his hometown in the state of Utah was cancelled amid safety concerns.
Sgt. Bowe Bergdahl has not made any public comment since his release, but on Thursday, the Daily Beast website published a letter it said was one of two the soldier sent to his parents during his captivity through the International Red Cross.
In the letter, Bowe Bergdahl says he left because conditions were deteriorating at the base.
Excerpts of Bowe Bergdahl’s journals sent to a friend before he went missing, published by the Washington Post, suggest a young soldier struggling to handle the mental stress of war.
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